10 Underrated Train Destinations to Experience Japan’s Hidden Charm

I’ve been getting more and more interested in train travel lately, so I’ve been doing a lot of research on interesting train routes, train stations, and trains! Japan is one of the best countries to go on train adventures, and of course I’ve done heaps of research for just that.

This post is a collection of 10 Japanese train stations, where you can see something cool near the station. I’ve focused on off-the-beaten-path places, where they aren’t necessarily on the major tourist trail for casual visitors to Japan. I’ve also included directions from Tokyo (using the train) and notes on which train passes cover which routes.

If you’re interested in off-the-beaten-path Japan, this guide is perfect for you. Exploring Japan by train reveals a world of charming and scenic destinations that aren’t on the typical tourist trail.

quick picks
  • Yudanaka Station (Nagano Prefecture)– see monkeys in the hot springs! (During winter anyway)
  • Tottori (Tottori Prefecture)– sand dunes!
  • Matsushima (Miyagi Prefecture)– one of the most beautiful places in Japan!

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1. Okuoikojo Station (Shizuoka Prefecture)

Photo by 阿里山林業鐵路及文化資產管理處, Attribution, via Wikimedia Commons

This is maybe the most famous of Japan’s train stations. Perched on a narrow peninsula surrounded by the emerald-green waters of Lake Sesso, Okuoikojo Station is known for its “floating bridge,” a narrow pedestrian walkway that provides stunning views of the lake and the surrounding mountains. Okuoikojo Station is one of the true hidden gems in Shizuoka Prefecture. The journey itself is one of the most scenic train rides in Japan, with vintage trains and forested landscapes.

Directions from Tokyo
  • From Tokyo Station, take the Tokaido Shinkansen to Shizuoka Station (~1 hour).
  • Transfer to the Tokaido Main Line to Kanaya Station (~30 minutes).
  • From Kanaya, take the Oigawa Railway to Senzu Station (~1 hour).
  • Finally, transfer to the Ikawa Line and get off at Okuoikojo Station (~1 hour).

Total Travel Time: About 4 hours.

🚅The Oigawa Railway segment of this journey is not covered by the Japan Rail Pass, so you’ll need to purchase a separate ticket for this portion.

Tip: Sit on the left side of the train for the best views of Sesso Lake as you approach the station.

Why Visit?

Are you a photographer? Are you interested in unique settings and beautiful nature scenes? This station is the place for you!

While it’s famous for its utterly Instagrammable backdrop, it’s a bit out of the way from a normal touring plan. If you come out here, it’s because you want to see something special. The area’s isolation adds to its charm, offering an experience of rural Japan that feels worlds away from the hustle of the big cities.

The train ride to Okuoikojo Station is also an experience worth putting in time for. The Oigawa Railway is known for its vintage trains, including steam engines. As the train winds through forested mountains, crosses high bridges, and passes through tunnels, it reveals glimpses of quiet villages and dramatic landscapes that are rarely seen from the main transport routes.

Is It Worth Going?

Getting to Okuoikojo Station takes some planning, as trains on the Ikawa Line are infrequent. Also, the area lacks shops or restaurants (boo). However, the stunning scenery makes it an unforgettable day trip– especially if you’re into photography. Bring snacks or a packed lunch, and take your time exploring the station and its surroundings. It’s an ideal spot to unwind and experience a different side of Japan’s rail system.

My Thoughts

This is one of those places that’s going on my bucket list. It looks insanely beautiful, and even though I’m not a professional photographer I’d love the chance to get some photos of the station and surrounding area. I’m also a fan of going on retro trains, so this just sounds like a fun experience. Definitely adding it to my must-do list for my next visit to Japan!

2. Kakunodate (Akita Prefecture)

Photo by Kaz Ish, CC BY-SA 3.0, via Wikimedia Commons

Often referred to as the “Little Kyoto of Tohoku,” Kakunodate is a charming town famous for its well-preserved samurai district and seasonal cherry blossoms. The town’s train station, located on the Akita Shinkansen line, is easily accessible for travelers exploring northern Japan.

Directions from Tokyo
  • From Tokyo Station, take the Akita Shinkansen Komachi to Kakunodate Station (~3 hours).

Total Travel Time: About 3 hours.

🚅Good news for Japan Rail Pass holders: this entire journey is covered!

Why Visit?

Kakunodate’s samurai district offers a glimpse into the Edo period, with historic residences that have been carefully preserved. Many of these homes are open to the public, where you can see traditional architecture, gardens, and artifacts that tell the story of the people who once lived there. Walking through the district’s streets, lined with weeping cherry trees, is particularly beautiful in spring when the blossoms are in full bloom.

Beyond the samurai district, Kakunodate’s cultural heritage is reflected in its dedication to traditional crafts, such as Kabazaiku (cherry bark woodworking). Visitors can explore workshops, meet artisans, and even purchase unique handmade souvenirs.

To fully appreciate Kakunodate’s samurai heritage, consider booking a guided walking tour that covers the historic district and local crafts.

Is It Worth Going?

For history buffs, culture enthusiasts, or anyone already visiting Akita Prefecture, Kakunodate is well worth the trip. Its accessibility via the Shinkansen makes it a convenient stop (especially if you have a JR Pass), and its mix of natural beauty and historical significance ensures a memorable experience. Plan your visit in spring for cherry blossoms or in autumn for colorful foliage, and take time to enjoy the town’s relaxed, timeless atmosphere.

My Thoughts

Keep in mind that traveling during cherry blossom season to places famous for cherry blossoms WILL mean you’ll run into crowds– usually of local tourists! So if you’re planning on going here during high cherry blossom season, be sure to book your hotels well ahead of time. That said, Kakunodate is a perfect addition to a second-time Japan travel itinerary, where you’re probably looking for places with a blend of history and charm.

3. Hase Station (Kanagawa Prefecture)

Hase Station, located in Kamakura, is the gateway to some of the city’s most iconic cultural and historical landmarks. Situated along the Enoden Line, this station is an easy stop for those exploring the coastal area of Kanagawa Prefecture. Bonus: the Enoden Line itself is scenic, winding along the coast and offering glimpses of Enoshima Island.

Directions from Tokyo
  • From Tokyo Station, take the JR Yokosuka Line to Kamakura Station (~1 hour).
  • Transfer to the Enoden Line and ride to Hase Station (~5 minutes).

Total Travel Time: About 1 hour 10 minutes.

🚅The JR Yokosuka Line to Kamakura is covered by the Japan Rail Pass. However, the Enoden Line from Kamakura to Hase Station is operated by a private company and is not covered by the pass. You can either get a separate ticket, or purchase the Enoshima-Kamakura Freepass which gives unlimited rides on the Enoden Line and includes a round-trip on the Odakyu Line between your departure station and Fujisawa Station.

Why Visit?

Hase Station is most famous for its proximity to the Great Buddha (Kamakura Daibutsu), a towering bronze statue that has stood for over 750 years. Located a short walk from the station, the statue is a must-see for people interested in Japan’s religious and artistic heritage. Nearby, you’ll find Hase-dera Temple, known for its beautiful hydrangea garden.

You’re also fairly close to Yuigahama Beach, a relaxed coastal spot perfect for unwinding after a day of sightseeing. The combo of historical significance and natural beauty makes Hase Station an ideal starting point for exploring Kamakura.

🌟Book a tour with a local photographer and you’ll get to explore the major sights PLUS get some great vacation photos!

Is It Worth Going?

Hase Station’s convenient location to Tokyo, and it’s proximity to some of Kamakura’s top attractions make it worth stopping. Whether you’re interested in history, religion, or simply enjoying a scenic coastal town, Hase Station offers a well-rounded experience that’s easy to fit into your itinerary.

My Thoughts

Hase Station offers one of the most unique day trips from Tokyo by train, combining history, nature, and coastal charm. I’m always looking for more day-trip options, and this one looks perfect!

4. Yudanaka Station (Nagano Prefecture)

Located in the mountains of Nagano Prefecture, Yudanaka Station is the gateway to the famous Jigokudani Monkey Park and the region’s rejuvenating hot springs. It’s also the final stop on the Nagano Electric Railway. This spot is one of the secret spots in Japan for repeat travelers who want a more authentic countryside experience.

Directions from Tokyo
  • From Tokyo Station, take the Hokuriku Shinkansen to Nagano Station (~1.5 hours).
  • Transfer to the Nagano Dentetsu Line to Yudanaka Station (~45 minutes).
  • A bus from Yudanaka Station takes you to the Jigokudani Monkey Park in about 15 minutes.

Total Travel Time: About 2.5 hours + 15 minutes on the bus.

🚅The Hokuriku Shinkansen to Nagano Station portion is covered by the Japan Rail Pass. However, the Nagano Dentetsu Line to Yudanaka is a private railway and is not covered by the pass, so you’ll need to get a separate ticket.

Why Visit?

Yudanaka Station is best known for its proximity to the Jigokudani Monkey Park, where visitors can observe Japanese macaques soaking in natural hot springs during the colder months (see photo!). This rare sight has made the area a bucket-list destination for animal lovers and photographers alike.

The station is also surrounded by traditional ryokan (Japanese inns) and public onsen, which makes it a good place to experience Japan’s hot spring culture. In winter, Yudanaka becomes a base for skiers heading to nearby Shiga Kogen, one of Japan’s premier ski resorts.

🌟Make the most of your visit to Jigokudani Monkey Park with a day tour from Tokyo, which often includes transportation, park entry, and a visit to nearby onsen towns.

Is It Worth Going?

If you’re interested in wildlife, relaxation, or winter sports, Yudanaka Station is absolutely worth visiting. This is one of the parts of Japan where you can see wild animals in relative safety, so it’s worth it for that if nothing else. Be sure to dress warmly if visiting in winter and plan for a full day to explore the park and enjoy the local hot springs.

My Thoughts

Another place that gets a lot of hype online, but people rarely seem to actually go to. Perhaps because people only want to see the monkeys chilling out in the hot springs during winter? I’m sure it’s a wonderful place to visit outside of that one season, though, and of course the monkeys live there year-round so you’ll always be able to see them.

5. Shimonada Station (Ehime Prefecture)

Photo by Captain76, CC BY-SA 3.0, via Wikimedia Commons

Shimonada Station is known as one of the most scenic train stations in Japan, sitting along the coast of Ehime Prefecture with views of the Seto Inland Sea. As part of the Yosan Line, it’s famous for its dramatic sunsets and quiet seaside vibes.

Directions from Tokyo
  • From Tokyo Station, take the Tokaido-Sanyo Shinkansen to Okayama Station (~3.5 hours).
  • Transfer to the JR Seto-Ohashi Line to Matsuyama Station (~2.5 hours).
  • From Matsuyama, take the JR Yosan Line to Shimonada Station (~50 minutes).

Total Travel Time: About 7 hours.

🚅This route is totally covered by the JR Pass! Score!

Why Visit?

Shimonada Station’s open-air design and proximity to the sea make it a dream location for photographers and travelers seeking a serene escape. Often described as the “station closest to the sea,” it offers crazy beautiful views where the tracks seem to vanish into the horizon. Visiting during sunset is especially recommended, as the sky and water are painted in breathtaking shades of orange and pink.

The station also holds cultural significance, having been featured in several movies and TV shows. For those interested in local culture, the surrounding area offers small coastal villages and opportunities to try Ehime’s popular citrus products, such as mikan oranges.

Is It Worth Going?

Definitely! Shimonada Station’s coastal charm and picturesque setting make it a must-visit for those wanting a more charming setting than the typical large cities offer. While it’s a small station with minimal facilities, its serene beauty and the chance to experience Japan’s coastal scenery at its finest more than justify the journey. Pack a camera and enjoy the quiet, meditative atmosphere that this special spot provides. For those seeking less crowded destinations in Japan, this coastal gem is a perfect escape.

My Thoughts

The nice thing about being an island country is that there’s TONS of beach locations to visit. This one seems more beautiful than most, making it an ideal stop as part of a longer visit.

6. Tottori (Tottori Prefecture)

Tottori Station serves as the gateway to a region known for its natural wonders and cultural heritage. Located on the JR San’in Main Line, this station provides access to one of Japan’s most iconic landscapes—the Tottori Sand Dunes. This stop is a fantastic example of hidden attractions near Japanese train stations.

Directions from Tokyo
  • From Tokyo Station, take the Tokaido-Sanyo Shinkansen to Himeji Station (~3 hours).
  • Transfer to the Limited Express Super Hakuto to Tottori Station (~1.5 hours).

Total Travel Time: About 4.5 hours.

🚅The Limited Express Super Hakuto between Himeji and Tottori operates on non-JR tracks for certain segments, requiring an additional fee even for Japan Rail Pass holders. Consider getting the JR Kansai Wide Area Pass if traveling extensively within the Kansai region. Otherwise, be prepared to pay additional fees for the non-JR segments.

Why Visit?

The Tottori Sand Dunes, Japan’s largest sand dune system, are just a short bus ride from the station. Visitors can explore the rolling dunes on foot, try sandboarding, or take a camel ride for a unique perspective. The Sand Museum nearby features intricate sand sculptures created by artists from around the world, adding an artistic element to the visit.

In addition to the dunes, Tottori is known for its fresh seafood, particularly crab, which can be enjoyed at local markets and restaurants. The region also boasts scenic coastal views, hiking trails, and hot springs, offering a variety of activities for nature lovers and food enthusiasts alike.

Is It Worth Going?

For those looking to experience a different side of Japan, Tottori Station is absolutely worth a visit. The combination of dramatic natural scenery, cultural attractions, and local cuisine makes it a standout destination. Whether you’re climbing the dunes or trying the region’s famous crab dishes, Tottori offers a memorable experience.

My Thoughts

Did you even know that Japan had sand dunes? I was SO CLOSE to this spot during my first visit to Japan, but I didn’t make it over to Tottori Station and now I’m kicking myself.

Photo by ncole458, CC BY 2.0, via Wikimedia Commons

7. Takayama (Gifu Prefecture)

Takayama Station is the gateway to the beautifully preserved Edo-period town of Takayama, often referred to as “Little Kyoto.” Tucked in the mountainous Hida region, this station provides access to a charming destination known for its traditional streets, historic homes, and cultural festivals. The journey to Takayama takes you through some of the most beautiful historic train routes in Japan.

Directions from Tokyo
  • From Tokyo Station, take the Tokaido Shinkansen to Nagoya Station (~1.5 hours).
  • Transfer to the Limited Express Hida to Takayama Station (~2.5 hours).

Total Travel Time: About 4 hours.

🚅The entire route via the Tokaido Shinkansen to Nagoya and the Limited Express Hida is fully covered by the Japan Rail Pass. Yay!

Why Visit?

Takayama’s old town is a treasure trove of Japanese history, with beautifully preserved wooden buildings housing shops, breweries, and museums. Visitors can wander through Sanmachi Suji, a historic district lined with traditional merchant houses, and try local specialties such as Hida beef and Takayama ramen.

The region is also famous for its seasonal festivals, including the Takayama Spring and Autumn Festivals, which feature ornate floats and lively celebrations. Just a short trip from the station, the Hida Folk Village offers a glimpse into rural life, showcasing traditional thatched-roof farmhouses and cultural artifacts.

Surrounded by stunning scenery, Takayama is also a gateway to outdoor adventures in the Japanese Alps, making it a great destination for both cultural exploration and nature lovers.

Is It Worth Going?

For sure! Especially if you love nature, culture, and history, or if you want a glimpse of traditional Japan.

My Thoughts

Because it’s further away from Tokyo than other “preserved towns,” perhaps that means this one is going to be less crowded with tourists? I also love trying local specialties, especially different types of ramen. Yum!

8. Hirosaki (Aomori Prefecture)

Photo by Kazuo ota on Unsplash

Hirosaki Station serves as the starting point for exploring one of northern Japan’s most culturally rich and pretty cities. Located on the JR Ou Line, this station provides easy access to Hirosaki’s famous castle, seasonal festivals, and surrounding apple orchards.

Directions from Tokyo
  • From Tokyo Station, take the Tohoku Shinkansen to Shin-Aomori Station (~3 hours).
  • Transfer to the Ou Main Line to Hirosaki Station (~40 minutes).

Total Travel Time: About 3.5 hours.

🚅The Tohoku Shinkansen to Shin-Aomori section and the JR Ou Main Line is fully covered by the Japan Rail Pass. Huzzah!

Why Visit?

Hirosaki is famous for its cherry blossom festival, held each spring in Hirosaki Castle Park. The historic three-story castle keep is surrounded by thousands of cherry trees, creating a beautiful setting for hanami (flower viewing). In autumn, the park comes alive with bright reds and oranges. During summer, the lush greenery offers a peaceful escape, while winter covers the castle grounds in snow, creating a calm and quiet atmosphere. These changes throughout the year make it a great place for nature lovers to visit any time.

Hirosaki is also known for its apples. As one of Japan’s top apple-growing regions, the city offers plenty of ways to enjoy this local specialty. You can try freshly made cider and pies or join an apple-picking experience at nearby orchards, a fun way to connect with the area’s farming traditions.

For those interested in traditional arts, Hirosaki is a hub for Tsugaru shamisen music, a unique style of Japanese folk music. Several cultural centers and performances are available to immerse visitors in this rich heritage.

Is It Worth Going?

Absolutely! Whether you’re visiting for the cherry blossoms, autumn foliage, or cultural experiences, Hirosaki has something for everyone. From its natural beauty to its rich history and delicious local produce, this city stands out as a must-see destination in Aomori Prefecture.

My Thoughts

Like most popular places, it’s popular during the two prettiest seasons: cherry blossoms, and when the autumn starts turning leaves into pretty colors. If you’re looking to avoid major crowds, plan your visit for sometimes outside of those two seasons.

9. Matsushima (Miyagi Prefecture)

Photo by Nikka Lirio on Unsplash

Matsushima Station is the perfect starting point for exploring Matsushima Bay, known as one of Japan’s “Three Most Scenic Views.” Located along the JR Senseki Line, this station provides easy access to a beautiful coastal area filled with natural beauty and cultural treasures.

Directions from Tokyo
  • From Tokyo Station, take the Tohoku Shinkansen to Sendai Station (~1.5 hours).
  • Transfer to the JR Senseki Line to Matsushimakaigan Station (~40 minutes).

Total Travel Time: About 2 hours.

🚅The Tohoku Shinkansen to Sendai and the JR Senseki Line to Matsushimakaigan Station are fully covered by the Japan Rail Pass. Woohoo!

Why Visit?

Matsushima Bay is scattered with over 200 small pine-covered islands, creating a peaceful landscape that’s inspired poets and artists for centuries. Visitors can take boat cruises that weave through the islands, offering close-up views and plenty of photo opportunities of this unique natural scenery.

For history enthusiasts, Matsushima features Zuigan-ji Temple, a centuries-old Zen temple known for its painted fusuma (sliding doors) and tranquil gardens. Nearby, Godaido Hall provides a great view of the bay from a small island connected by red-lacquered bridges.

Seafood lovers will also enjoy Matsushima’s culinary offerings, especially its fresh oysters, which are a local specialty. Restaurants and food stalls near the station serve a variety of oyster dishes, making it a fantastic destination for food enthusiasts.

Is It Worth Going?

Definitely! Matsushima’s mix of natural beauty, cultural history, and amazing local food makes it well worth a visit. Whether you’re taking in the iconic bay views, exploring historic temples, or enjoying fresh oysters, Matsushima offers a memorable experience in Miyagi Prefecture.

My Thoughts

A classic place of natural beauty that isn’t visited by foreign tourists as much– at least, I’ve never heard any other Westerners talk about it! It’s not even that far from Tokyo, so it’s a shame it seems to be so little-known in comparison to other places. Guess that’s a good opportunity for you to visit without being totally crowded by other Westerners, eh?

10. Kinosaki Onsen (Hyogo Prefecture)

Photo by Roméo A. on Unsplash

Kinosaki Onsen Station is the gateway to one of Japan’s most beloved hot spring towns. Located on the JR San-in Line, this charming station provides easy access to Kinosaki Onsen, a picturesque town known for its seven public hot springs and traditional atmosphere.

Directions from Tokyo
  • From Tokyo Station, take the Tokaido-Sanyo Shinkansen to Shin-Osaka Station (~2.5 hours).
  • Transfer to the Limited Express Kounotori to Kinosaki Onsen Station (~2.5 hours).

Total Travel Time: About 5 hours.

🚅The Tokaido-Sanyo Shinkansen to Shin-Osaka and the Limited Express Kounotori to Kinosaki Onsen are fully covered by the Japan Rail Pass. Yay!

Why Visit?

If you want a quintessential Japanese hot spring experience, Kinosaki Onsen is the place to be. Visitors can stroll through the town in yukata (light cotton robes) and geta (wooden sandals) while visiting the seven public bathhouses, each with its own unique character and healing properties. It’s like stepping back in time and seeing what old Japan was like.

In addition to its onsen culture, Kinosaki is also known for its fresh seafood, particularly crab. Local restaurants and ryokan serve seasonal specialties that highlight the region’s flavors.

For those seeking nature, the nearby Kinosaki Ropeway offers views of the town and the Sea of Japan, and the surrounding area is ideal for hikes or cycling. The Maruyama River adds to the scenic beauty, especially during cherry blossom season (as always).

Is It Worth Going?

If you’re looking for a relaxing break from big city life, for sure! You can also book a wellness stay at a nearby town and really make the most of the spa atmosphere.

My Thoughts

Unfortunately I’m one of those people who aren’t interested in hot springs so while this town looks beautiful and I’d love to take pictures (and eat a bunch of crab dishes), I’m not sure if it’d be worth stopping by. What do you think?

Final Thoughts

One of the unique things about Japan and its train stations is that every destination has its own identity. The stations all have their own mascots, they have their own eki stamps, and they’ve got a totally local identity. Exploring Japan through train rides is a great way to explore the culture of Japan’s people.

And if you’re looking for Japan off-the-beaten-path travel tips, exploring these stations will give you an authentic and memorable experience.

Which station will you visit first? Let me know in the comments—I’d love to hear about your plans!

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